`epm up` hook crashes if repository deleted

General

EPM Version: 0.7.0

Report: repositories_5937f88edd407

Modules: epm git commands repositories docker fbs user

Steps to reproduce

1. Create a repository
2. Synchronize with remote host
3. Clone the project on another PC
4. Delete the repository
5. Synchronize with remote host
6. Run epm up on the other pc

Expected behavior

Repository is deleted without issues.

Actual behavior

The module crashes when it tries to apply the updaterepositories_5937f88edd407.txt